<?xml version="1.0" encoding="utf-8" standalone="no"?>
<!DOCTYPE article SYSTEM "http://www.atmos-meas-tech.net/inc/amt/copernicus.dtd">
<article language="en">
	<journal>
		<journal_title>Atmospheric Measurement Techniques</journal_title>
		<journal_url>www.atmos-meas-tech.net</journal_url>
		<issn>1867-1381</issn>
		<eissn>1867-8548</eissn>
		<volume_number>3</volume_number>
		<issue_number>4</issue_number>
		<publication_year>2010</publication_year>
	</journal>
	<doi>10.5194/amt-3-1039-2010</doi>
	<article_url>http://www.atmos-meas-tech.net/3/1039/2010/</article_url>
	<abstract_html>http://www.atmos-meas-tech.net/3/1039/2010/amt-3-1039-2010.html</abstract_html>
	<fulltext_pdf>http://www.atmos-meas-tech.net/3/1039/2010/amt-3-1039-2010.pdf</fulltext_pdf>
	<start_page>1039</start_page>
	<end_page>1053</end_page>
	<publication_date>2010-08-17</publication_date>
	<article_title content_type="html">A high-resolution mass spectrometer to measure atmospheric ion composition</article_title>
	<authors>
		<author numeration="1" affiliations="1">
			<name>H. Junninen</name>
			<email>heikki.junninen@helsinki.fi</email>
		</author>
		<author numeration="2" affiliations="1">
			<name>M. Ehn</name>
		</author>
		<author numeration="3" affiliations="1">
			<name>T. Petäjä</name>
		</author>
		<author numeration="4" affiliations="2">
			<name>L. Luosujärvi</name>
		</author>
		<author numeration="5" affiliations="2,3">
			<name>T. Kotiaho</name>
		</author>
		<author numeration="6" affiliations="3">
			<name>R. Kostiainen</name>
		</author>
		<author numeration="7" affiliations="4">
			<name>U. Rohner</name>
		</author>
		<author numeration="8" affiliations="4">
			<name>M. Gonin</name>
		</author>
		<author numeration="9" affiliations="4">
			<name>K. Fuhrer</name>
		</author>
		<author numeration="10" affiliations="1">
			<name>M. Kulmala</name>
		</author>
		<author numeration="11" affiliations="1,5">
			<name>D. R. Worsnop</name>
		</author>
	</authors>
	<affiliations>
		<affiliation numeration="1" content_type="html">Department of Physics, P.O. Box 64, 00014, University of Helsinki, Helsinki, Finland</affiliation>
		<affiliation numeration="2" content_type="html">Department of Chemistry, P.O. Box 55, 00014, University of Helsinki, Helsinki, Finland</affiliation>
		<affiliation numeration="3" content_type="html">Division of Pharmaceutical Chemistry, P.O. Box 56, 00014, University of Helsinki, Helsinki, Finland</affiliation>
		<affiliation numeration="4" content_type="html">Tofwerk AG, 3600 Thun, Switzerland</affiliation>
		<affiliation numeration="5" content_type="html">Aerodyne Research Inc, Billerica, MA 01821, USA</affiliation>
	</affiliations>
	<abstract content_type="html">In this paper we present recent achievements on developing and testing a tool
to detect the composition of ambient ions in the mass/charge range up to
2000 Th. The instrument is an Atmospheric Pressure Interface Time-of-Flight
Mass Spectrometer (APi-TOF, Tofwerk AG). Its mass accuracy is better than
0.002%, and the mass resolving power is 3000 Th/Th. In the data analysis,
a new efficient Matlab based set of programs (tofTools) were developed,
tested and used. The APi-TOF was tested both in laboratory conditions and
applied to outdoor air sampling in Helsinki at the SMEAR III station.
Transmission efficiency calibrations showed a throughput of 0.1–0.5% in
the range 100–1300 Th for positive ions, and linearity over 3 orders of
magnitude in concentration was determined. In the laboratory tests the
APi-TOF detected sulphuric acid-ammonia clusters in high concentration from
a nebulised sample illustrating the potential of the instrument in revealing
the role of sulphuric acid clusters in atmospheric new particle formation.
The APi-TOF features a high enough accuracy, resolution and sensitivity for
the determination of the composition of atmospheric small ions although the
total concentration of those ions is typically only 400–2000 cm&lt;sup&gt;−3&lt;/sup&gt;.
The atmospheric ions were identified based on their exact masses, utilizing
Kendrick analysis and correlograms as well as narrowing down the potential
candidates based on their proton affinities as well isotopic patterns. In
Helsinki during day-time the main negative ambient small ions were inorganic
acids and their clusters. The positive ions were more complex, the main
compounds were (poly)alkyl pyridines and – amines. The APi-TOF provides
a near universal interface for atmospheric pressure sampling, and this key
feature will be utilized in future laboratory and field studies.</abstract>
	<references>
		<reference numeration="1" content_type="text"> Arnold,~F.: Atmospheric ions and aerosol formation, Space Sci. Rev., 137, 225–239, 2008. </reference>
		<reference numeration="2" content_type="text"> Arnold,~F.: Multi-Ion complexes in the Stratosphere – implications for trace gases and aerosol, Nature, 284, 610–611, 1980. </reference>
		<reference numeration="3" content_type="text"> Asmi, E., Sipilä, M., Manninen, H. E., Vanhanen, J., Lehtipalo, K., Gagné, S., Neitola, K., Mirme, A., Mirme, S., Tamm, E., Uin, J., Komsaare, K., Attoui, M., and Kulmala, M.: Results of the first air ion spectrometer calibration and intercomparison workshop, Atmos. Chem. Phys., 9, 141–154, doi:10.5194/acp-9-141-2009, 2009. </reference>
		<reference numeration="4" content_type="text"> De Gouw,~J A. and Warneke,~C.: Measurements of volatile organic compounds in the earth&apos;s atmosphere using proton-transfer-reaction mass spectrometry, Mass Spectrom. Rev., 26, 223–257, 2006. </reference>
		<reference numeration="5" content_type="text"> DeCarlo,~P F., Kimmel,~J R., Trimborn,~A., Northway,~M J., Jayne,~J T., Aiken,~A C., Gonin,~M., Fuhrer,~K., Horvath,~T., Docherty,~K S., Worsnop,~D R., and Jimenez,~J L.: Field-deployable, high-resolution, time-of-flight aerosol mass spectrometer, Anal. Chem., 78, 8281–8289, 2006. </reference>
		<reference numeration="6" content_type="text"> Eisele,~F L.: Identification of tropospheric ions,~J. Geophys. Res., 91, 7897–7906, 1986. </reference>
		<reference numeration="7" content_type="text"> Eisele,~F L.: Natural and anthropogenic negative-ions in the troposphere, J. Geophys. Res.-Atmos., 94, 2183–2196, 1989a. </reference>
		<reference numeration="8" content_type="text"> Eisele,~F L.: Natural and transmission-line produced positive-ions, J. Geophys. Res.-Atmos., 94, 6309–6318, 1989b. </reference>
		<reference numeration="9" content_type="text"> Fernandez de la Mora,~J., Thomson,~B A., and Gamero-Castano,~M.: Tandem mobility mass spectrometry study of electrosprayed tetraheptyl ammonium bromide clusters, J. Am. Soc. Mass Spectr., 16, 717–732, 2005. </reference>
		<reference numeration="10" content_type="text"> Guilhaus,~M., Selby,~D., and Mlynski,~V.: Orthogonal acceleration time-of-flight mass spectrometry, Mass Spectrom Rev., 19, 65–107, 2000 </reference>
		<reference numeration="11" content_type="text"> Haapala,~M., Luosujarvi,~L., Saarela,~V., Kotiaho,~T., Ketola,~R A., Franssila,~S., and Kostiainen,~R.: Microchip for combining gas chromatography or capillary liquid chromatography with atmospheric pressure photoionization-mass spectrometry, Anal. Chem., 79, 4994–4999, 2007. </reference>
		<reference numeration="12" content_type="text"> Hanson,~D R. and Eisele,~F L.: Measurement of prenucleation molecular clusters in the \chemNH_3, \chemH_2SO_4, \chemH_2O system, J. Geophys. Res., 107, 4158, doi:10.1029/2001JD001100, 2002. </reference>
		<reference numeration="13" content_type="text"> Harrison,~R G. and Tammet,~H.: Ions in the terrestrial atmosphere and other solar system atmospheres, Space Sci. Rev., 137, 107–118, 2008. </reference>
		<reference numeration="14" content_type="text"> Herrmann,~W., Eichler,~T., Bernardo,~N., and Fernandez de la Mora,~J.: Turbulent transition arises at Re 35 000 in a~short Vienna type DMA with a~large laminarizing inlet, Proceedings of the annual conference of the AAAR, St. Louis, MO, 6–10 October 2000. </reference>
		<reference numeration="15" content_type="text"> Hirsikko,~A., Laakso,~L., Hõrrak,~U., Aalto,~P P., Kerminen,~V.-M., and Kulmala,~M.: Annual and size dependent variation of growth rates and ion concentrations in boreal forest, Boreal Environ. Res., 10, 357–369, 2005. </reference>
		<reference numeration="16" content_type="text"> Hoffmann,~T., O&apos;Dowd,~C D., and Seinfeld,~J H.: Iodine oxide homogeneous nucleation: an explanation for coastal new particle production, Geophys. Res. Lett., 28, 1949–1952, 2001. </reference>
		<reference numeration="17" content_type="text"> Huey,~L G.: Measurement of trace atmospheric species by chemical ionization mass spectrometry: Speciation of reactive nitrogen and future directions, Mass. Spectrom. Rev., 26, 166–184, 2007. </reference>
		<reference numeration="18" content_type="text"> Hughey,~C A., Hendrickson,~C L., Rodgers,~R P., Marshall,~A G., and Qian,~K N.: Kendrick mass defect spectrum: a~compact visual analysis for ultrahigh-resolution broadband mass spectra, Anal. Chem., 73, 4676–4681, 2001. </reference>
		<reference numeration="19" content_type="text"> Hussein,~T., Dal Maso,~M., Petaja,~T., Koponen,~I K., Paatero,~P., Aalto,~P P., Hameri,~K., and Kulmala,~M.: Evaluation of an automatic algorithm for fitting the particle number size distributions, Boreal Environ. Res., 10, 337–355, 2005. </reference>
		<reference numeration="20" content_type="text"> Iida,~K., Stolzenburg,~M R., McMurry,~P H., and Smith,~J N.: Estimating nanoparticle growth rates from size-dependent charged fractions: Analysis of new particle formation events in Mexico City, J. Geophys. Res.-Atmos., 113, D05207, doi:10.1029/2007JD009260, 2008. </reference>
		<reference numeration="21" content_type="text"> Jaitly,~N., Monroe,~M E., Petyuk,~V A., Clauss,~T R W., Adkins,~J N., and Smith,~R D.: Robust algorithm for alignment of liquid chromatography-mass spectrometry analyses in an accurate mass and time tag data analysis pipeline, Anal. Chem., 78, 7397–7409, 2006. </reference>
		<reference numeration="22" content_type="text"> Järvi,~L., Hannuniemi,~H., Hussein,~T., Junninen,~H., Aalto,~P P., Hillamo,~R., Makela,~T., Keronen,~P., Siivola,~E., Vesala,~T., and Kulmala,~M.: The urban measurement station SMEAR III: Continuous monitoring of air pollution and surface-atmosphere interactions in Helsinki, Finland, Boreal Environ. Res., 14, 86–109, 2009. </reference>
		<reference numeration="23" content_type="text"> Jayne,~J T., Leard,~D C., Zhang,~X F., Davidovits,~P., Smith,~K A., Kolb,~C E., and Worsnop,~D R.: Development of an aerosol mass spectrometer for size and composition analysis of submicron particles, Aerosol Sci. Technol., 33, 49–70, 2000. </reference>
		<reference numeration="24" content_type="text"> Jimenez,~J L., Canagaratna,~M R., Donahue,~N M., Prevot,~N M., Zhang,~Q., Kroll,~J H., DeCarlo,~P F., Allan,~J D., Coe,~H., Ng,~N L., Aiken,~A C., Docherty,~K S., Ulbrich,~I M., Grieshop,~A P., Robinson,~A L., Duplissy,~J., Smith,~J D., Wilson,~K R., Lanz,~V A., Hueglin,~C., Sun,~Y L., Tian,~J., Laaksonen,~A., Raatikainen,~T., Rautiainen,~J., Vaattovaara,~P., Ehn,~M., Kulmala,~M., Tomlinson,~J M., Collins,~D R., Cubison,~M J., Dunlea,~E J., Huffman,~J A., Onasch,~T B., Alfarra,~M R., Williams,~P I., Bower,~K., Kondo,~Y., Schneider,~J., Drewnick,~F., Borrmann,~S., Weimer,~S., Demerjian,~K., Salcedo,~D., Cottrell,~L., Griffin,~R., Takami,~A., Miyoshi,~T., Hatakeyama,~S., Shimono,~A., Sun,~J Y., Zhang,~Y M., Dzepina,~K., Kimmel,~J R., Sueper,~D., Jayne,~J T., Herndon,~S C., Trimborn,~A M., Williams,~L R., Wood,~E C., Middlebrook,~A M., Kolb,~C E., Baltensperger,~U., and Worsnop,~D R.: Evolution of Organic Aerosols in the Atmosphere, Science, 326, 1525–1529, 2009. </reference>
		<reference numeration="25" content_type="text"> Jordan,~A., Haidacher,~S., Hanel,~G., Hartungen,~E., Mark,~L., Seehauser,~H., Schottkowsky,~R., Sulzer,~P., and Mark,~T D.: A~high resolution and high sensitivity proton-transfer-reaction time-of-flight mass spectrometer (PTR-TOF-MS), Int. J. Mass. Spectrom., 286, 122–128, 2009. </reference>
		<reference numeration="26" content_type="text"> Kendrick,~E.: A~mass scale based on $\chemCH_2=14.0000$ for high resolution mass spectrometry of organic compounds, Anal. Chem., 35, 2146–2154, 1963. </reference>
		<reference numeration="27" content_type="text"> Kerminen,~V.-M., Pirjola,~L., and Kulmala,~M.: How signifigantly does coagulation scavening limit atmospheric particle production?, J. Geophys. Res., 106, 24119–24125, 2001. </reference>
		<reference numeration="28" content_type="text"> Ku,~B K. and Fernandez de la Mora, J.: Relation between electrical mobility, mass, and size for nanodrops 1–6.5 nm in diameter in air, Aerosol Sci. Technol., 43, 241–249, 2009. </reference>
		<reference numeration="29" content_type="text"> Kulmala,~M. and Kerminen,~V M.: On the formation and growth of atmospheric nanoparticles, Atmos. Res., 90, 132–150, 2008. </reference>
		<reference numeration="30" content_type="text"> Kulmala,~M., Riipinen,~I., Sipila,~M., Manninen,~H E., Petaja,~T., Junninen,~H., Dal Maso,~M., Mordas,~G., Mirme,~A., Vana,~M., Hirsikko,~A., Laakso,~L., Harrison,~R M., Hanson,~I., Leung,~C., Lehtinen,~K E J., and Kerminen,~V M.: Toward direct measurement of atmospheric nucleation, Science, 318, 89–92, 2007. </reference>
		<reference numeration="31" content_type="text"> Kulmala,~M., Vehkamaki,~H., Petaja,~T., Dal Maso,~M., Lauri,~A., Kerminen,~V M., Birmili,~W., and McMurry,~P H.: Formation and growth rates of ultrafine atmospheric particles: a~review of observations, J. Aerosol Sci., 35, 143–176, 2004. </reference>
		<reference numeration="32" content_type="text"> Kulmala,~M.: How particles nucleate and grow, Science, 302, 1000–1001, 2003. </reference>
		<reference numeration="33" content_type="text"> Marquardt,~D W.: An algorithm for least-squares estimation of nonlinear parameters, J. Soc. Ind. Appl. Math., 11, 431–441, 1963. </reference>
		<reference numeration="34" content_type="text"> Martinez-Lozano,~P. and de la Mora,~J F.: On-line detection of human skin vapors, J. Am. Soc. Mass. Spectr., 20, 1060–1063, 2009. </reference>
		<reference numeration="35" content_type="text"> Mirme,~A., Tamm,~E., Mordas,~G., Vana,~M., Uin,~J., Mirme,~S., Bernotas,~T., Laakso,~L., Hirsikko,~A. and Kulmala,~M.: A~wide-range multi-channel air ion spectrometer, Boreal Environ. Res., 12, 247–264, 2007. </reference>
		<reference numeration="36" content_type="text"> O&apos;Dowd,~C D., Jimenez,~J L., Bahreini,~R., Flagan,~R C., Seinfeld,~J H., Hameri,~K., Pirjola,~L., Kulmala,~M., Jennings,~S G., and Hoffmann,~T.: Marine aerosol formation from biogenic iodine emissions, Nature, 417, 632–636, 2002. </reference>
		<reference numeration="37" content_type="text"> Ortega, I. K., Kurtén, T., Vehkamäki, H., and Kulmala, M.: Corrigendum to &quot;The role of ammonia in sulfuric acid ion induced nucleation&quot; published in Atmos. Chem. Phys., 8, 2859–2867, 2008, Atmos. Chem. Phys., 9, 7431–7434, doi:10.5194/acp-9-7431-2009, 2009. </reference>
		<reference numeration="38" content_type="text"> Östman,~P., Marttila,~S J., Kotiaho,~T., Franssila,~S., and Kostiainen,~R.: Microchip atmospheric pressure chemical ionization source for mass spectrometry, Anal. Chem., 76, 6659–6664, 2004. </reference>
		<reference numeration="39" content_type="text"> Saarela,~V., Haapala,~M., Kostiainen,~R., Kotiaho,~T., and Franssila,~S.: Glass microfabricated nebulizer chip for mass spectrometry, Lab Chip, 7, 644–646, 2007. </reference>
		<reference numeration="40" content_type="text"> Sipila,~M., Lehtipalo,~K., Attoui,~M., Neitola,~K., Petaja,~T., Aalto,~P P., O&apos;Dowd,~C D., and Kulmala,~M.: Laboratory verification of PH-CPC&apos;s ability to monitor atmospheric sub-3 nm clusters, Aerosol Sci. Technol., 43, 126–135, 2009. </reference>
		<reference numeration="41" content_type="text"> Sipilä, M., Lehtipalo, K., Kulmala, M., Petäjä, T., Junninen, H., Aalto, P. P., Manninen, H. E., Kyrö, E.-M., Asmi, E., Riipinen, I., Curtius, J., Kürten, A., Borrmann, S., and O&apos;Dowd, C. D.: Applicability of condensation particle counters to measure atmospheric clusters, Atmos. Chem. Phys., 8, 4049–4060, doi:10.5194/acp-8-4049-2008, 2008. </reference>
		<reference numeration="42" content_type="text"> Smith,~J N., Dunn,~M J., Vanreken,~T M., Iida,~K., Stolzenburg,~M R., McMurry,~P H., and Huey,~L G.: Chemical composition of atmospheric nanoparticles formed from nucleation in Tecamac, Mexico: Evidence for an important role for organic species in nanoparticle growth, Geophys. Res. Lett., 35, L04808, doi:10.1029/2007GL032523, 2008. </reference>
		<reference numeration="43" content_type="text"> Smith,~J N., Moore,~K F., Eisele,~F L., Voisin,~D., Ghimire,~A K., Sakurai,~H., and McMurry,~P H.: Chemical composition of atmospheric nanoparticles during nucleation events in Atlanta,~J. Geophys. Res., 110, D22S03, \doi10.1029/2005JD005912, 2005. </reference>
		<reference numeration="44" content_type="text"> Smith,~J S., Laskin,~A., and Laskin,~J.: Molecular characterization of biomass burning aerosols using high-resolution mass spectrometry, Anal. Chem., 81, 1512–1521, 2009. </reference>
		<reference numeration="45" content_type="text"> Tanner,~D J. and Eisele,~F L.: Ions in oceanic and continental air masses, J. Geophys. Res.-Atmos., 96, 1023–1031, 1991. </reference>
		<reference numeration="46" content_type="text"> Ude,~S. and Fernandez de la Mora,~J F.: Molecular monodisperse mobility and mass standards from electrosprays of tetra-alkyl ammonium halides, J. Aerosol. Sci., 36, 1224–1237, 2005. </reference>
		<reference numeration="47" content_type="text"> Voisin,~D., Smith,~J N., Sakurai,~H., McMurry,~P H., and Eisele,~F L.: Thermal desorption chemical ionization mass spectrometer for ultrafine particle chemical composition, Aerosol Sci. Technol., 37, 471–475, 2003. </reference>
		<reference numeration="48" content_type="text"> Vorm,~O. and Mann,~M.: Improved Mass Accuracy in Matrix-Assisted Laser Desorption/Ionization Timeof- Flight Mass-Spectrometry of Peptides, J. Am. Soc. Mass. Spectr., 5, 955–958, 1994. </reference>
		<reference numeration="49" content_type="text"> Wolski,~W E., Lalowski,~M., Jungblut,~P., and Reinert,~K.: Calibration of mass spectrometric peptide mass fingerprint data without specific external or internal calibrants, BMC Bioinformatics, 6, 203, doi:10.1186/1471-2105-6-203, 2005.  </reference>
		<reference numeration="50" content_type="text"> Zhao, J., Eisele, F. L., Titcombe, M., Kuang, C., and McMurry, P. H.: Chemical ionization mass spectrometric measurements of atmospheric neutral clusters using the cluster-CIMS, J. Geophys. Res., 115, D08205, doi:10.1029/2009JD012606, 2010. </reference>
	</references>
</article>

