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Volume 8, issue 11
Atmos. Meas. Tech., 8, 4615–4636, 2015
https://doi.org/10.5194/amt-8-4615-2015
© Author(s) 2015. This work is distributed under
the Creative Commons Attribution 3.0 License.
Atmos. Meas. Tech., 8, 4615–4636, 2015
https://doi.org/10.5194/amt-8-4615-2015
© Author(s) 2015. This work is distributed under
the Creative Commons Attribution 3.0 License.

Research article 03 Nov 2015

Research article | 03 Nov 2015

Peak-fitting and integration imprecision in the Aerodyne aerosol mass spectrometer: effects of mass accuracy on location-constrained fits

J. C. Corbin1,2, A. Othman3,a, J. D. Allan4,5, D. R. Worsnop6, J. D. Haskins7, B. Sierau1, U. Lohmann1, and A. A. Mensah1 J. C. Corbin et al.
  • 1ETH Zurich, Institute for Atmospheric and Climate Science, Zurich, Switzerland
  • 2Laboratory for Atmospheric Chemistry, Paul Scherrer Institute, Villigen, Switzerland
  • 3University of Zurich, Institute for Clinical Chemistry, Zurich, Switzerland
  • 4National Centre for Atmospheric Science, University of Manchester, Manchester, UK
  • 5School of Earth, Atmospheric and Environmental Sciences, University of Manchester, Manchester, UK
  • 6Aerodyne Research Inc., Billerica, Massachusetts, USA
  • 7Massachusetts Institute of Technology, Boston, Massachusetts, USA
  • anow at: Institute of Experimental and Clinical Pharmacology and Toxicology, University of Lübeck, Lübeck, Germany

Abstract. The errors inherent in the fitting and integration of the pseudo-Gaussian ion peaks in Aerodyne high-resolution aerosol mass spectrometers (HR-AMSs) have not been previously addressed as a source of imprecision for these or similar instruments. This manuscript evaluates the significance of this imprecision and proposes a method for their estimation in routine data analysis.

In the first part of this work, it is shown that peak-integration errors are expected to scale linearly with peak height for the constrained-peak-shape fits performed in the HR-AMS. An empirical analysis is undertaken to investigate the most complex source of peak-integration imprecision: the imprecision in fitted peak height, σh. It is shown that the major contributors to σh are the imprecision and bias inherent in the m/z calibration, both of which may arise due to statistical and physical non-idealities of the instrument. A quantitative estimation of these m/z-calibration imprecisions and biases show that they may vary from ion to ion, even for ions of similar m/z.

In the second part of this work, the empirical analysis is used to constrain a Monte Carlo approach for the estimation of σh and thus the peak-integration imprecision. The estimated σh for selected well-separated peaks (for which m/z-calibration imprecision and bias could be quantitatively estimated) scaled linearly with peak height as expected (i.e. as n1). In combination with the imprecision in peak-width quantification (which may be easily and directly estimated during quantification), peak-fitting imprecisions therefore dominate counting imprecisions (which scale as n0.5) at high signals. The previous HR-AMS uncertainty model therefore underestimates the overall fitting imprecision even for well-resolved peaks. We illustrate the importance of this conclusion by performing positive matrix factorization on a synthetic HR-AMS data set both with and without its inclusion.

In the third part of this work, the Monte Carlo approach is extended to the case of an arbitrary number of overlapping peaks. Here, a modification to the empirically constrained approach was needed, because the ion-specific m/z-calibration bias and imprecision can generally only be estimated for well-resolved peaks. The modification is to simply overestimate the m/z-calibration imprecision in all cases. This overestimation results in only a slight overestimate of σh, while significantly reducing the sensitivity of σh to the unknown, ion-specific m/z-calibration biases. Thus, with only the measured data and an approximate estimate of the order of magnitude of m/z-calibration biases as input, conservative and unbiased estimates of peak-integration imprecisions may be obtained for each peak in any ensemble of overlapping peaks.

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Peak-integration uncertainties in the Aerodyne high-resolution aerosol mass spectrometer (AMS) are analyzed in detail using a combination of empirical data analysis and Monte Carlo approaches. The most general conclusion, applicable to any mass spectrometer, is that non-zero mass accuracy leads to a percentage error in constrained peak fits, even for well-resolved peaks. For overlapping peaks, this mass-accuracy effect may be viewed as a reduction in the effective m/z-calibration precision.
Peak-integration uncertainties in the Aerodyne high-resolution aerosol mass spectrometer (AMS)...
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